Last updated on 2026-07-09 14:00:47 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 6.45 | 140.84 | 147.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.84 | 97.62 | 102.46 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 10.00 | 401.80 | 411.80 | OK | |
| r-devel-windows-x86_64 | 2.10.0 | 11.00 | 150.00 | 161.00 | OK | |
| r-patched-linux-x86_64 | 2.10.0 | 7.72 | 134.77 | 142.49 | OK | |
| r-release-linux-x86_64 | 2.10.0 | 6.69 | 133.84 | 140.53 | OK | |
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 13.00 | 147.00 | 160.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 2.00 | 38.00 | 40.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 13.00 | 183.00 | 196.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: 1: outer(X, Y)outer(X, Y)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 2: 2: -theta %o% x-theta %o% x
> test_loo_and_waic.R:
> test_loo_and_waic.R: 3: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 4: 4: psis_smooth_tail(lw_tail, cutoff)psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 5: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 9: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: 9: tryCatch(expr, error = function(e) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) call <- conditionCall(e)
> test_loo_and_waic.R: if (!is.null(call)) {10: if (identical(call[[1L]], quote(doTryCatch))) tryCatchList(expr, classes, parentenv, handlers) call <- sys.call(-4L)
> test_loo_and_waic.R: dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]11: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")tryCatch(expr, error = function(e) { if (is.na(w)) call <- conditionCall(e) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (!is.null(call)) { type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...) }
> test_loo_and_waic.R: else prefix <- "Error : "15: msg <- paste0(prefix, conditionMessage(e), "\n")lapply(seq_len(cores), inner.do) .Internal(seterrmessage(msg[1L]))
> test_loo_and_waic.R: if (!silent && isTRUE(getOption("show.error.messages"))) {16: cat(msg, file = outFile)parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, .Internal(printDeferredWarnings()) method = method) }
> test_loo_and_waic.R: invisible(structure(msg, class = "try-error", condition = e))18: })importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores,
> test_loo_and_waic.R: method = is_method)12:
> test_loo_and_waic.R: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)19:
> test_loo_and_waic.R: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)13:
> test_loo_and_waic.R: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))20:
> test_loo_and_waic.R: loo(LLarr, r_eff = r_eff_arr, cores = 2)14:
> test_loo_and_waic.R: FUN(X[[i]], ...)21:
> test_loo_and_waic.R: withCallingHandlers(expr, warning = function(w) if (inherits(w, 15: classes)) tryInvokeRestart("muffleWarning"))lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 22: 16: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores,
> test_loo_and_waic.R: method = method)23:
> test_loo_and_waic.R: eval(code, test_env)18:
> test_loo_and_waic.R: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ method = is_method) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations19: if (snapshot_skipped) {loo.array(LLarr, r_eff = r_eff_arr, cores = 2) skip("On CRAN")
> test_loo_and_waic.R: }20: else if (!new_expectations && skip_on_empty) {loo(LLarr, r_eff = r_eff_arr, cores = 2) skip_empty()
> test_loo_and_waic.R: }21: }, expectation = handle_expectation, packageNotFoundError = function(e) {withCallingHandlers(expr, warning = function(w) if (inherits(w, if (on_cran()) { classes)) tryInvokeRestart("muffleWarning")) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }22: }, snapshot_on_cran = function(cnd) {suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")23: }, skip = handle_skip, warning = handle_warning, message = handle_message, eval(code, test_env) error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 24: 26:
> test_loo_and_waic.R: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }28: }, snapshot_on_cran = function(cnd) {tryCatchList(expr, classes, parentenv, handlers) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")29: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatch(withCallingHandlers({ error = handle_error, interrupt = handle_interrupt) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations26: if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler) skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }27: }, snapshot_on_cran = function(cnd) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")28: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchList(expr, classes, parentenv, handlers) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 29: 30: tryCatch(withCallingHandlers({doWithOneRestart(return(expr), restart) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {31: skip_empty()withOneRestart(expr, restarts[[1L]]) }
> test_loo_and_waic.R: }, expectation = handle_expectation, packageNotFoundError = function(e) {32: if (on_cran()) {withRestarts(tryCatch(withCallingHandlers({ skip(paste0("{", e$package, "} is not installed.")) eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, snapshot_on_cran = function(cnd) { if (snapshot_skipped) { snapshot_skipped <<- TRUE skip("On CRAN") invokeRestart("muffle_cran_snapshot") }}, skip = handle_skip, warning = handle_warning, message = handle_message, else if (!new_expectations && skip_on_empty) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")
> test_loo_and_waic.R: }, skip = handle_skip, warning = handle_warning, message = handle_message, 30: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), doWithOneRestart(return(expr), restart) end_test = function() {
> test_loo_and_waic.R: })31:
> test_loo_and_waic.R: withOneRestart(expr, restarts[[1L]])33:
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationstest_code(code, parent.frame()) if (snapshot_skipped) {
> test_loo_and_waic.R: skip("On CRAN")34: }test_that("loo with cores=1 and cores=2 gives same results", else if (!new_expectations && skip_on_empty) { { skip_empty() loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, } cores = 2))}, expectation = handle_expectation, packageNotFoundError = function(e) { expect_equal(loo1$estimates, loo2$estimates) if (on_cran()) { }) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }35: }, snapshot_on_cran = function(cnd) {eval(code, test_env) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")36: }, skip = handle_skip, warning = handle_warning, message = handle_message, eval(code, test_env) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame()) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()
> test_loo_and_waic.R: }34: }, expectation = handle_expectation, packageNotFoundError = function(e) {test_that("loo with cores=1 and cores=2 gives same results", if (on_cran()) { { skip(paste0("{", e$package, "} is not installed.")) loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, } cores = 2))}, snapshot_on_cran = function(cnd) { expect_equal(loo1$estimates, loo2$estimates) snapshot_skipped <<- TRUE }) invokeRestart("muffle_cran_snapshot")
> test_loo_and_waic.R: }, skip = handle_skip, warning = handle_warning, message = handle_message, 35: error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: eval(code, test_env)39:
> test_loo_and_waic.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])36:
> test_loo_and_waic.R: eval(code, test_env)40:
> test_loo_and_waic.R: tryCatchList(expr, classes, parentenv, handlers)37:
> test_loo_and_waic.R: withCallingHandlers({41: eval(code, test_env)tryCatch(withCallingHandlers({ new_expectations <- the$test_expectations > starting_expectations eval(code, test_env) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { } skip_empty()}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot") if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot") error = handle_error, interrupt = handle_interrupt)}, skip = handle_skip, warning = handle_warning, message = handle_message,
> test_loo_and_waic.R: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: 38: withRestarts(tryCatch(withCallingHandlers({doTryCatch(return(expr), name, parentenv, handler) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations39: if (snapshot_skipped) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip("On CRAN")
> test_loo_and_waic.R: }40: else if (!new_expectations && skip_on_empty) {tryCatchList(expr, classes, parentenv, handlers) skip_empty()
> test_loo_and_waic.R: }41: }, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatch(withCallingHandlers({ if (on_cran()) { eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, snapshot_on_cran = function(cnd) { skip("On CRAN") snapshot_skipped <<- TRUE } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new()) if (on_cran()) {
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed."))46: }
> test_loo_and_waic.R: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) {}, snapshot_on_cran = function(cnd) { cat(conditionMessage(cnd), "\n") snapshot_skipped <<- TRUE NULL invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)})
> test_loo_and_waic.R: 52:
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {{ if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {{ snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler) { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: NULL51: }tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) {with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: base::assign(".Traceback", base::.traceback(4), envir = callr_data)(function (path, shuffle) utils::dump.frames("__callr_dump__"){ asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE)) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess")
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle) } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] }57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", compress = FALSE)
> test_loo_and_waic.R: if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }58: base::withCallingHandlers({ { NULL NULL }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } base::invisible()
> test_loo_and_waic.R: pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") }}, error = function(e) { else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { } base::assign(".Traceback", base::.traceback(4), envir = callr_data) }) utils::dump.frames("__callr_dump__")}) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`,
> test_loo_and_waic.R: envir = callr_data)59: base::rm("__callr_dump__", envir = .GlobalEnv)doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_and_waic.R: e <- err$process_call(e)60: e2 <- err$new_error("error in callr subprocess")tryCatchOne(expr, names, parentenv, handlers[[1L]]) class <- base::class
> test_loo_and_waic.R: class(e2) <- base::c("callr_remote_error", class(e2))61: e2 <- err$add_trace_back(e2)tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) cut <- base::which(e2$trace$scope == "global")[1]
> test_loo_and_waic.R: if (!base::is.na(cut)) {62: e2$trace <- e2$trace[-(1:cut), ]doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_and_waic.R: if (callr_data$has_otel) {63: callr_data$otel_span$record_exception(e2)tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), } names[nh], parentenv, handlers[[nh]]) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) {
> test_loo_and_waic.R: base::assign(".Traceback", base::.traceback(4), envir = callr_data)64: utils::dump.frames("__callr_dump__")tryCatchList(expr, classes, parentenv, handlers) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`,
> test_loo_and_waic.R: envir = callr_data)65: base::rm("__callr_dump__", envir = .GlobalEnv)base::tryCatch(base::withCallingHandlers({ } { e <- err$process_call(e) NULL e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } err <- callr_data$err pxlib$write_fd(3L, data) if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]]) else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) {
> test_loo_and_waic.R: {61: NULLtryCatchList(expr, names[-nh], parentenv, handlers[-nh]) NULL
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) }
> test_loo_and_waic.R: if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1)64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ } { base::invisible() NULL}, interrupt = function(e) { NULL { } NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea817376a9f"), An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R: base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea83738f8a1", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R: 23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: }-theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff) else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message,
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), FUN(X[[i]], ...) end_test = function() {
> test_loo_predictive_metric.R: }) 7:
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9:
> test_loo_predictive_metric.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e)
> test_loo_predictive_metric.R: if (!is.null(call)) {34: if (identical(call[[1L]], quote(doTryCatch))) doTryCatch(return(expr), name, parentenv, handler) call <- sys.call(-4L)
> test_loo_predictive_metric.R: dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") }37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle)) else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())
> test_loo_predictive_metric.R: }39: invisible(structure(msg, class = "try-error", condition = e))asNamespace("testthat")$queue_task(path, shuffle)})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list")
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) {parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, asNamespace("testthat")$queue_task(path, shuffle) method = method)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: 19: quote = TRUE)psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 43: 20: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), psis(-LL, r_eff = r_eff, cores = 2) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_predictive_metric.R: quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", 21: compress = FALSE)eval(code, test_env)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 44: 22: base::withCallingHandlers({eval(code, test_env) {
> test_loo_predictive_metric.R: NULL23: NULLwithCallingHandlers({ } eval(code, test_env) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), new_expectations <- the$test_expectations > starting_expectations base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, if (snapshot_skipped) { quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", skip("On CRAN") compress = FALSE) } base::flush(base::stdout()) else if (!new_expectations && skip_on_empty) { base::flush(base::stderr()) skip_empty() { } NULL}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } NULL}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE base::invisible() invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) {}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: err <- callr_data$errwithRestarts(tryCatch(withCallingHandlers({ if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) eval(code, test_env) cut <- base::which(e2$trace$scope == "global")[1] new_expectations <- the$test_expectations > starting_expectations if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }}, interrupt = function(e) { } {}, snapshot_on_cran = function(cnd) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` snapshot_skipped <<- TRUE err <- callr_data$err invokeRestart("muffle_cran_snapshot") if (FALSE) {}, skip = handle_skip, warning = handle_warning, message = handle_message, base::assign(".Traceback", base::.traceback(4), envir = callr_data) error = handle_error, interrupt = handle_interrupt), error = handle_fatal), utils::dump.frames("__callr_dump__") end_test = function() { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2)32:
> test_loo_predictive_metric.R: cut <- base::which(e2$trace$scope == "global")[1]source_file(path, env = env(env), desc = desc, shuffle = shuffle, if (!base::is.na(cut)) { error_call = error_call) e2$trace <- e2$trace[-(1:cut), ]
> test_loo_predictive_metric.R: }33: if (callr_data$has_otel) {test_one_file(path, env = the$testing_env, shuffle = shuffle) callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: }, callr_message = function(e) {tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: base::try({36: callr_data <- base::as.environment("tools:callr")$`__callr_data__`tryCatchList(expr, classes, parentenv, handlers) pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e,
> test_loo_predictive_metric.R: NULL)))37: data <- base::paste0(e$code, " ", base::nchar(msg), "\n", tryCatch(code, testthat_abort_reporter = function(cnd) { msg) cat(conditionMessage(cnd), "\n") if (callr_data$has_otel) { NULL callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) {}) base::invokeRestart("muffleMessage")
> test_loo_predictive_metric.R: }38: })with_reporter(multi, test_one_file(path, env = the$testing_env, }) shuffle = shuffle))
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 39: 45: asNamespace("testthat")$queue_task(path, shuffle)doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 40: 46: (function (path, shuffle) tryCatchOne(expr, names, parentenv, handlers[[1L]]){
> test_loo_predictive_metric.R: asNamespace("testthat")$queue_task(path, shuffle)47: })(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 41: 48: (function (what, args, quote = FALSE, envir = parent.frame()) doTryCatch(return(expr), name, parentenv, handler){
> test_loo_predictive_metric.R: if (!is.list(args)) 49: stop("second argument must be a list")tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), if (quote) names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, asNamespace("testthat")$queue_task(path, shuffle) quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr())}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: {base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), NULL base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, NULL quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", } compress = FALSE) base::invisible()
> test_loo_predictive_metric.R: }, error = function(e) {44: {base::withCallingHandlers({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` { err <- callr_data$err NULL if (FALSE) { NULL base::assign(".Traceback", base::.traceback(4), envir = callr_data) } utils::dump.frames("__callr_dump__") base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, envir = callr_data) quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", base::rm("__callr_dump__", envir = .GlobalEnv) compress = FALSE) } base::flush(base::stdout()) e <- err$process_call(e) base::flush(base::stderr()) e2 <- err$new_error("error in callr subprocess") { NULL NULL } class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { base::invisible() e2$trace <- e2$trace[-(1:cut), ]}, error = function(e) { } { if (callr_data$has_otel) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data$otel_span$record_exception(e2) err <- callr_data$err } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }}, interrupt = function(e) { if (FALSE) { { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err e <- err$process_call(e) if (FALSE) { e2 <- err$new_error("error in callr subprocess") base::assign(".Traceback", base::.traceback(4), envir = callr_data) class <- base::class utils::dump.frames("__callr_dump__") class(e2) <- base::c("callr_remote_error", class(e2)) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, e2 <- err$add_trace_back(e2) envir = callr_data) cut <- base::which(e2$trace$scope == "global")[1] base::rm("__callr_dump__", envir = .GlobalEnv) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") if (callr_data$has_otel) { class <- base::class callr_data$otel_span$record_exception(e2) class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", cut <- base::which(e2$trace$scope == "global")[1] ".error")) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ]}, interrupt = function(e) { } { if (callr_data$has_otel) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data$otel_span$record_exception(e2) err <- callr_data$err } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }}, callr_message = function(e) { if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) base::try({ } callr_data <- base::as.environment("tools:callr")$`__callr_data__`
> test_loo_predictive_metric.R: e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" data <- base::paste0(e$code, " ", base::nchar(msg), "\n", } msg) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, if (callr_data$has_otel) { NULL))) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46: tryCatchOne(expr, names, parentenv, handlers[[1L]]) pxlib$write_fd(3L, data)
> test_loo_predictive_metric.R: if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL47: NULL } if (FALSE) { base::try(base::stop(e)) }tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: if (FALSE) {49: base::q(save = "no", status = 1)tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), } names[nh], parentenv, handlers[[nh]]) base::invisible()
> test_loo_predictive_metric.R: }, interrupt = function(e) {50: {tryCatchList(expr, classes, parentenv, handlers) NULL
> test_loo_predictive_metric.R: NULL51: }base::tryCatch(base::withCallingHandlers({ if (FALSE) { { base::q(save = "no", status = 1) NULL } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpuZCTQb/callr-fun-15ea83ce60fd2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpuZCTQb/callr-rs-result-15ea82418c33a", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64